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The Inhibitory Potential of Ferulic Acid Derivatives against the SARS-CoV-2 Main Protease: Molecular Docking, Molecular Dynamics, and ADMET Evaluation
Luleå University of Technology, Department of Civil, Environmental and Natural Resources Engineering, Chemical Engineering.ORCID iD: 0000-0002-7754-9398
Luleå University of Technology, Department of Civil, Environmental and Natural Resources Engineering, Chemical Engineering.ORCID iD: 0000-0002-5087-641x
Luleå University of Technology, Department of Civil, Environmental and Natural Resources Engineering, Chemical Engineering.ORCID iD: 0000-0001-7500-2367
Luleå University of Technology, Department of Civil, Environmental and Natural Resources Engineering, Chemical Engineering.ORCID iD: 0000-0003-0079-5950
2022 (English)In: Biomedicines, E-ISSN 2227-9059, Vol. 10, no 8, article id 1787Article in journal (Refereed) Published
Abstract [en]

The main protease (Mpro) of SARS-CoV-2 is an appealing target for the development of antiviral compounds, due to its critical role in the viral life cycle and its high conservation among different coronaviruses and the continuously emerging mutants of SARS-CoV-2. Ferulic acid (FA) is a phytochemical with several health benefits that is abundant in plant biomass and has been used as a basis for the enzymatic or chemical synthesis of derivatives with improved properties, including antiviral activity against a range of viruses. This study tested 54 reported FA derivatives for their inhibitory potential against Mpro by in silico simulations. Molecular docking was performed using Autodock Vina, resulting in comparable or better binding affinities for 14 compounds compared to the known inhibitors N3 and GC376. ADMET analysis showed limited bioavailability but significantly improved the solubility for the enzymatically synthesized hits while better bioavailability and druglikeness properties but higher toxicity were observed for the chemically synthesized ones. MD simulations confirmed the stability of the complexes of the most promising compounds with Mpro, highlighting FA rutinoside and compound e27 as the best candidates from each derivative category. View Full-TextKeywords: SARS-CoV-2; Mpro; enzyme inhibition; ferulic acid; molecular docking; molecular dynamics; ADMET

Place, publisher, year, edition, pages
MDPI, 2022. Vol. 10, no 8, article id 1787
Keywords [en]
SARS-CoV-2, Mpro, enzyme inhibition, ferulic acid, molecular docking, molecular dynamics, ADMET
National Category
Pharmaceutical Biotechnology Organic Chemistry
Research subject
Biochemical Process Engineering
Identifiers
URN: urn:nbn:se:ltu:diva-92365DOI: 10.3390/biomedicines10081787ISI: 000846223400001PubMedID: 35892687Scopus ID: 2-s2.0-85137327769OAI: oai:DiVA.org:ltu-92365DiVA, id: diva2:1685670
Note

Validerad;2022;Nivå 2;2022-08-04 (hanlid)

Available from: 2022-08-04 Created: 2022-08-04 Last updated: 2023-09-05Bibliographically approved

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Antonopoulou, IoSapountzaki, EleftheriaRova, UlrikaChristakopoulos, Paul

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