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Dataset: CT scan images of internal resinwood in Scots pine
Luleå University of Technology, Department of Engineering Sciences and Mathematics, Wood Science and Engineering. The Forestry Research Institute of Sweden, Uppsala, Sweden.ORCID iD: 0000-0002-6428-0422
Luleå University of Technology, Department of Engineering Sciences and Mathematics, Wood Science and Engineering.ORCID iD: 0000-0001-9196-0370
The Forestry Research Institute of Sweden, Uppsala, Sweden.
Department of Information Technology, Uppsala University, Uppsala, Sweden.
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2025 (English)Other (Refereed)
Resource type
Still image
Abstract [en]

Resinwood in Scots pine timber resulting from Cronartium pini infection represents an important quality defect, substantially reducing sawn yield and economic value in sawmilling. This dataset generated from X-ray computed tomography (CT) for non-destructive resinwood detection across wood moisture states. Scots pine specimens exhibiting external cankers were harvested and scanned using an industrial MicroTec CT scanner in both green and dry states, included full logs and 3-cm-thick discs. Comparative density analysis identified regions of interest based on elevated density patterns.

The scanner produced data using a cone beam and two angled flat detectors on a helical scanning trajectory. The spatial resolution and resulting voxel dimensions were uniform at 0.3 × 0.3 × 0.3 mm³. The resulting 3D images comprised 16-bit greyscale values representing density in kg/m³ at each location, and helical 1PI Katsevich was used for image reconstruction.

Place, publisher, year, pages
Luleå University of Technology, 2025.
Keywords [en]
Timber degrade, Non-destructive testing (NDT), Scots pine trees, Computed Tomography datasets, Wood Drying, Forest pathology
National Category
Wood Science
Research subject
Wood Science and Engineering
Identifiers
URN: urn:nbn:se:ltu:diva-114524DOI: 10.17044/scilifelab.29479973.v1OAI: oai:DiVA.org:ltu-114524DiVA, id: diva2:1993923
Funder
Swedish Foundation for Strategic ResearchThe Kempe FoundationsKnut and Alice Wallenberg Foundation
Note

Full text license: CC BY-NC-ND 4.0;

Repository: SciLifeLab Data Centre (via Figshare);

Related items: 10.1080/17480272.2025.2536725 (article); urn:nbn:se:ltu:diva-114610 (licentiate thesis)

Funder: Norra Skog Research Foundation

Available from: 2025-09-01 Created: 2025-09-01 Last updated: 2026-05-18Bibliographically approved
In thesis
1. Investigation of internal density variation in Scots pine using X-Ray computed tomography and image analysis
Open this publication in new window or tab >>Investigation of internal density variation in Scots pine using X-Ray computed tomography and image analysis
2025 (English)Licentiate thesis, comprehensive summary (Other academic)
Abstract [en]

Resinwood formation in Scots pine (Pinus sylvestris) resulting from Cronartium pini infection represents a critical quality defect that substantially reduces timber value and complicates industrial processing decisions in the Nordic Forest industry. Current timber grading protocols rely exclusively on visual surface inspection, which cannot detect internal resin accumulation patterns essential for optimal sawmill operations and volume yields. This knowledge gap generates cascading economic inefficiencies throughout timber processing, as sawmills cannot optimise cutting patterns without comprehensive internal defect information.

This doctoral research addresses these fundamental limitations by developing and validating non-destructive methods for detecting and segmentation of internal resinwood distribution using X-ray computed tomography (CT) imaging. The pathophysiological basis for this approach stems from the host defence mechanism whereby C. pini infection triggers systematic hyperproduction of oleoresin compounds that infiltrate wood tissues, generating distinguishable radiographic density variation, so the research work bridges this gap by integrating two approaches:

Algorithm Development: An automated segmentation pipeline combining Gaussian Mixture Models (GMM), multi-directional ray-casting, and morphological refinement was developed to distinguish resinwood from healthy tissues in CT imagery. The method processes ~7,000 slices per log, achieving high sensitivity for sapwood (0.98) and heartwood (0.80) segmentation. Resinwood detection attained moderate precision (0.25), limited by density overlaps with heartwood and CT image artefacts.Qualitative Feature Identification: CT analysis of paired green- and dry- state specimens revealed three diagnostic resinwood signatures: (a) growth-ring distortions, (b) non-concentric cambial development, and (c) ground-glass opacity patterns. Resin extraction validated these features, confirming increase resin content in CT-identified zones (41% vs. control: 2%, p < 0.001).Key novel scientific contribution:

Evaluated probabilistic framework for resinwood segmentation through industrial CT imaging.Dual-state (green/dry) CT scans enabling the utilisation of comparison imaging data for resinwood mapping in logs.Open-source implementation supporting model development in pilot testing for sawmill-related research and development.Challenges persist in distinguishing pathological resin accumulation from natural impregnation heartwood density gradients and moisture driven influenced false detections. Future work will integrate multi-threshold GMMs, more noise reduction, and spatial feature descriptors (e.g., resin morphology) to enhance specificity. This research establishes a foundation for data-driven defect detection and have potential to improve volume yield in production and processing optimisation in digitally assisted sawmilling.

Place, publisher, year, edition, pages
Luleå: Luleå University of Technology, 2025
Series
Licentiate thesis / Luleå University of Technology, ISSN 1402-1757
Keywords
computed tomography, image processing, segmentation, quality assessment, rust fungi, resinwood
National Category
Other Materials Engineering
Research subject
Wood Science and Engineering
Identifiers
urn:nbn:se:ltu:diva-114610 (URN)978-91-8048-903-4 (ISBN)978-91-8048-904-1 (ISBN)
Presentation
2025-10-24, A193, Luleå University of Technology, Skellefteå, 10:00 (English)
Opponent
Supervisors
Projects
CT-Wood
Available from: 2025-09-18 Created: 2025-09-18 Last updated: 2026-05-06Bibliographically approved

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Joevenller, ShengHuber, Johannes Albert JosefKarlsson, Olov

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